Transcript: LINC00208:2

Basic information

LNCipedia transcript ID: LINC00208:2 
LNCipedia gene ID: LINC00208
Location (hg38): chr8:11576535-11581342
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1928 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00014539
Alternative gene names: XLOC_006711; linc-GATA4-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -54.9246 non-coding 
CPAT coding probability 1.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00208:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BLK-1:2
3.1 lnc-BLK-1:2
4.0 LINC00208:2
4.1 LINC00208:2
5.0 LINC00208:2
5.1 LINC00208:2
5.2 LINC00208:2