Transcript: LINC002481:13

Basic information

LNCipedia transcript ID: LINC002481:13 
HGNC Gene Symbol: LINC002481    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2481
Ensembl Gene ID: ENSG00000246526
Ensembl Transcript ID: ENST00000499502
Location (hg38): chr4:6687448-6690519
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1821 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007713; ENST00000499502; ENST00000499502.2; RP11-539L10.2-001; OTTHUMT00000359635.1; NONHSAT095011
Alternative gene names: XLOC_003871; linc-PPP2R2C-2; ENSG00000246526; RP11-539L10.2; ENSG00000246526.2; OTTHUMG00000160124.2; LINC002481


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.5534 non-coding 
CPAT coding probability 8.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC002481:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MRFAP1L1-1:2
3.1 lnc-MRFAP1L1-1:2
4.0 lnc-MRFAP1L1-1:2
4.1 lnc-MRFAP1L1-1:2
5.0 lnc-MRFAP1L1-1:2
5.1 LINC002481:7
5.2 LINC002481:13