Transcript: LINC00266-1:1

Basic information

LNCipedia transcript ID: LINC00266-1:1 
HGNC Gene Symbol: LINC00266-1    
HGNC Full Gene Name: long intergenic non-protein coding RNA 266-1
Ensembl Gene ID: ENSG00000149656
Ensembl Transcript ID: ENST00000279067
Location (hg38): chr20:64290385-64303559
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 928 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000279067.3; LINC00266-1-001; OTTHUMT00000080304.2; NONHSAT081035
Alternative gene names: ENSG00000149656.4; LINC00266-1; OTTHUMG00000033036.2; ENSG00000149656.8; bA476I15.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 42.1501 non-coding 
CPAT coding probability 19.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00266-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCMTD2-1:1
4.0 LINC00266-1:1
4.1 LINC00266-1:1
5.0 LINC00266-1:1
5.1 LINC00266-1:1
5.2 LINC00266-1:1