Transcript: LINC00284:16

Basic information

LNCipedia transcript ID: LINC00284:16 
HGNC Gene Symbol: LINC00284    
HGNC Full Gene Name: long intergenic non-protein coding RNA 284
Ensembl Gene ID: ENSG00000233725
Ensembl Transcript ID: ENST00000423211
Location (hg38): chr13:44025319-44029937
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3208 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00021543; ENST00000423211; ENST00000423211.1; LINC00284-002; OTTHUMT00000044729.1; NONHSAT033476
Alternative gene names: XLOC_010368; linc-SERP2-4; ENSG00000233725; NCRNA00284; ENSG00000233725.1; LINC00284; OTTHUMG00000016827.1; ENSG00000233725.3; ENSG00000233725.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.2965 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00284:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LACC1-1:4
3.1 lnc-LACC1-1:4
4.0 LINC00284:16
4.1 LINC00284:16
5.0 LINC00284:16
5.1 LINC00284:16
5.2 LINC00284:16