Transcript: LINC00290:1

Basic information

LNCipedia transcript ID: LINC00290:1 
LNCipedia gene ID: LINC00290
Location (hg38): chr4:181064092-181159149
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 590 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00007374
Alternative gene names: XLOC_004191; linc-AGA-4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -292.3649 non-coding 
CPAT coding probability 2.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00290:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DCTD-5:1
3.1 lnc-DCTD-7:2
4.0 LINC00290:1
4.1 LINC00290:1
5.0 LINC00290:1
5.1 LINC00290:1
5.2 LINC00290:1