Transcript: LINC00304:3

Basic information

LNCipedia transcript ID: LINC00304:3 
HGNC Gene Symbol: LINC00304    
HGNC Full Gene Name: long intergenic non-protein coding RNA 304
Ensembl Gene ID: ENSG00000180422
Ensembl Transcript ID: ENST00000562248
Location (hg38): chr16:89159146-89160562
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1095 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000562248.1; LINC00304-002; OTTHUMT00000430367.1; NONHSAT144473
Alternative gene names: ENSG00000180422.3; LINC00304; OTTHUMG00000175524.2; FLJ36701


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.9242 non-coding 
CPAT coding probability 28.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00304:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACSF3-1:1
4.0 LINC00304:3
4.1 LINC00304:3
5.0 LINC00304:3
5.1 LINC00304:3
5.2 LINC00304:3