Transcript: LINC00305:4

Basic information

LNCipedia transcript ID: LINC00305:4 
LNCipedia gene ID: LINC00305
RefSeq ID: NR_027245
Location (hg38): chr18:64080009-64149026
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 869 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_027245; NR_027245.1
Alternative gene names: MGC39571; HsT1235; LINC00305


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -74.7224 non-coding 
CPAT coding probability 19.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00305:4 no no no no

Available literature

  1. Zhang (2017), Long noncoding RNA LINC00305 promotes inflammation by activating the AHRR-NF-κB pathway in human monocytes., Sci Rep
  2. Zhang (2017), Long intergenic noncoding RNA 00305 sponges miR-136 to regulate the hypoxia induced apoptosis of vascular endothelial cells., Biomed. Pharmacother.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SERPINB3-1:6
4.0 LINC00305:4
4.1 LINC00305:4
5.0 LINC00305:4
5.1 LINC00305:4
5.2 LINC00305:4