Transcript: LINC00311:1

Basic information

LNCipedia transcript ID: LINC00311:1 
LNCipedia gene ID: LINC00311
Location (hg38): chr16:85165047-85554167
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 14828 bp
Exons: 45
Sources: NONCODE v4
Alternative transcript names: NONHSAT144112
Alternative gene names: MGC22001


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.5628 non-coding 
CPAT coding probability 23.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00311:1 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-680G10.1.1-1:2
4.0 LINC00311:1
4.1 LINC00311:1
5.0 LINC00311:1
5.1 LINC00311:1
5.2 LINC00311:1