Transcript: LINC00311:3

Basic information

LNCipedia transcript ID: LINC00311:3 
LNCipedia gene ID: LINC00311
Location (hg38): chr16:85282958-85288079
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1784 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT144117; NR_038859
Alternative gene names: MGC22001


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.9669 non-coding 
CPAT coding probability 26.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00311:3 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-680G10.1.1-1:3
4.0 LINC00311:3
4.1 LINC00311:3
5.0 LINC00311:3
5.1 LINC00311:3
5.2 LINC00311:3