Transcript: LINC00311:5

Basic information

LNCipedia transcript ID: LINC00311:5 
LNCipedia gene ID: LINC00311
RefSeq ID: NR_038859
Location (hg38): chr16:85282958-85288082
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1787 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_038859.1
Alternative gene names: LINC00311


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -8.9669 non-coding 
CPAT coding probability 17.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00311:5 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC00311:5
5.1 LINC00311:5
5.2 LINC00311:5