Transcript: LINC00313:26

Basic information

LNCipedia transcript ID: LINC00313:26 
LNCipedia gene ID: LINC00313
Location (hg38): chr21:43456642-43460942
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 832 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT082413
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.568 non-coding 
CPAT coding probability 41.41% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00313:26 no no no no

Available literature

  1. Li (2015), Differentially expressed protein-coding genes and long noncoding RNA in early-stage lung cancer., Tumour Biol.
  2. Reymond (2002), Nineteen additional unpredicted transcripts from human chromosome 21., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SIK1-4:23
4.0 LINC00313:26
4.1 LINC00313:26
5.0 LINC00313:26
5.1 LINC00313:26
5.2 LINC00313:26