Transcript: LINC00319:12

Basic information

LNCipedia transcript ID: LINC00319:12 
LNCipedia gene ID: LINC00319
Location (hg38): chr21:43427512-43437781
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8945 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000188660.3|ENCT00000271938.1
Alternative gene names: PRED49; FLJ38036


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 22.9821 non-coding 
CPAT coding probability 37.27% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00319:12 no no no no

Available literature

  1. Zhou (2017), Long Intergenic Noncoding RNA 319 (linc00319) Promotes Cell Proliferation and Invasion in Lung Cancer Cells by Directly Downregulating the Tumor Suppressor MiR-32., Oncol. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00319:12
5.0 LINC00319:12
5.1 LINC00319:12
5.2 LINC00319:12