Transcript: LINC00320:10

Basic information

LNCipedia transcript ID: LINC00320:10 
LNCipedia gene ID: LINC00320
Location (hg38): chr21:20742921-20803108
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1625 bp
Exons: 7
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000435279; ENST00000435279.1; LINC00320-003; OTTHUMT00000170850.1
Alternative gene names: ENSG00000224924; NCRNA00320; ENSG00000224924.1; LINC00320; OTTHUMG00000078063.1; PRED14; FLJ37539


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.9562 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00320:10 no no no no

Available literature

  1. Mills (2015), Long intervening non-coding RNA 00320 is human brain-specific and highly expressed in the cortical white matter., Neurogenetics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMPRSS15-9:7
3.1 lnc-TMPRSS15-9:5
4.0 LINC00320:10
4.1 LINC00320:10
5.0 LINC00320:10
5.1 LINC00320:10
5.2 LINC00320:10