Transcript: LINC00320:15

Basic information

LNCipedia transcript ID: LINC00320:15 
LNCipedia gene ID: LINC00320
RefSeq ID: NR_109788
Location (hg38): chr21:20742590-20803108
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1956 bp
Exons: 7
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109788; NR_109788.1
Alternative gene names: PRED14; FLJ37539; LINC00320


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.9562 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00320:15 no no no no

Available literature

  1. Mills (2015), Long intervening non-coding RNA 00320 is human brain-specific and highly expressed in the cortical white matter., Neurogenetics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMPRSS15-9:18
4.0 LINC00320:15
4.1 LINC00320:15
5.0 LINC00320:15
5.1 LINC00320:15
5.2 LINC00320:15