Transcript: LINC00320:6

Basic information

LNCipedia transcript ID: LINC00320:6 
HGNC Gene Symbol: LINC00320    
HGNC Full Gene Name: long intergenic non-protein coding RNA 320
Ensembl Gene ID: ENSG00000224924
Ensembl Transcript ID: ENST00000435279
Location (hg38): chr21:20742921-20803216
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1733 bp
Exons: 7
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000435279.2; ENST00000435279.6
Alternative gene names: ENSG00000224924.2; LINC00320; ENSG00000224924.6; PRED14; FLJ37539


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.9562 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00320:6 no no no no

Available literature

  1. Mills (2015), Long intervening non-coding RNA 00320 is human brain-specific and highly expressed in the cortical white matter., Neurogenetics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMPRSS15-9:16
4.0 LINC00320:6
4.1 LINC00320:6
5.0 LINC00320:6
5.1 LINC00320:6
5.2 LINC00320:6