Transcript: LINC00326:3

Basic information

LNCipedia transcript ID: LINC00326:3 
HGNC Gene Symbol: LINC00326    
HGNC Full Gene Name: long intergenic non-protein coding RNA 326
Ensembl Gene ID: ENSG00000231023
Ensembl Transcript ID: ENST00000457339
Location (hg38): chr6:133088080-133106578
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2515 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000457339; ENST00000457339.1; LINC00326-002; OTTHUMT00000317882.1; NONHSAT114985; ENST00000457339.5
Alternative gene names: ENSG00000231023; NCRNA00326; ENSG00000231023.2; LINC00326; OTTHUMG00000015597.2; ENSG00000231023.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -105.7781 non-coding 
CPAT coding probability 27.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00326:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EYA4-1:3
3.1 lnc-EYA4-1:2
4.0 LINC00326:3
4.1 LINC00326:3
5.0 LINC00326:3
5.1 LINC00326:3
5.2 LINC00326:3