Transcript: LINC00327:6

Basic information

LNCipedia transcript ID: LINC00327:6 
HGNC Gene Symbol: LINC00327    
HGNC Full Gene Name: long intergenic non-protein coding RNA 327
Ensembl Gene ID: ENSG00000232977
Ensembl Transcript ID: ENST00000443778
RefSeq ID: NR_038995
Location (hg38): chr13:23469512-23487464
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2087 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000443778.2; LINC00327-001; OTTHUMT00000044154.2; NONHSAT032466; NR_038995; NR_038995.1
Alternative gene names: ENSG00000232977.2; LINC00327; OTTHUMG00000016566.2; ENSG00000232977.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -59.4788 non-coding 
CPAT coding probability 2.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00327:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TNFRSF19-5:5
4.0 LINC00327:6
4.1 LINC00327:6
5.0 LINC00327:6
5.1 LINC00327:6
5.2 LINC00327:6