Transcript: LINC00342:1

Basic information

LNCipedia transcript ID: LINC00342:1 
LNCipedia gene ID: LINC00342
RefSeq ID: NR_103734
Location (hg38): chr2:95807052-95826981
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3128 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT072509; NR_103734; NR_103734.1
Alternative gene names: ; LINC00342


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.8723 non-coding 
CPAT coding probability 55.93% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00342:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD36C-1:3
4.0 LINC00342:1
4.1 LINC00342:1
5.0 LINC00342:1
5.1 LINC00342:1
5.2 LINC00342:1