Transcript: LINC00353:3

Basic information

LNCipedia transcript ID: LINC00353:3 
LNCipedia gene ID: LINC00353
Location (hg38): chr13:89551233-89552389
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 330 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00021684; ENST00000434117; ENST00000434117.1; LINC00353-001; OTTHUMT00000045430.1; NONHSAT034634
Alternative gene names: XLOC_010686; linc-SLITRK6-5; ENSG00000236176; RP11-75N6.2; ENSG00000236176.1; LINC00353; OTTHUMG00000017179.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -169.1189 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00353:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLITRK6-12:2
3.1 lnc-SLITRK6-12:2
4.0 LINC00353:3
4.1 LINC00353:3
5.0 LINC00353:3
5.1 LINC00353:3
5.2 LINC00353:3