Transcript: LINC00355:16

Basic information

LNCipedia transcript ID: LINC00355:16 
LNCipedia gene ID: LINC00355
Location (hg38): chr13:63828769-63831852
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 790 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000450029.1; RP11-394A14.2-001; OTTHUMT00000045199.1; NONHSAT034180
Alternative gene names: ENSG00000219926.3; RP11-394A14.2; OTTHUMG00000017025.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.0909 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00355:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCDH20-10:1
4.0 lnc-PCDH20-10:1
4.1 LINC00355:16
5.0 LINC00355:16
5.1 LINC00355:16
5.2 LINC00355:16