Transcript: LINC00368:1

Basic information

LNCipedia transcript ID: LINC00368:1 
HGNC Gene Symbol: LINC00368    
HGNC Full Gene Name: long intergenic non-protein coding RNA 368
Ensembl Gene ID: ENSG00000225870
Ensembl Transcript ID: ENST00000422994
Location (hg38): chr13:111095838-111103097
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 650 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000422994; ENST00000422994.1; RP11-551M15.1-001; OTTHUMT00000045794.1; NONHSAT035198
Alternative gene names: ENSG00000225870; RP11-551M15.1; ENSG00000225870.1; OTTHUMG00000017352.1; LINC00368;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.2889 non-coding 
CPAT coding probability 3.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00368:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARHGEF7-1:1
3.1 lnc-ARHGEF7-1:1
4.0 LINC00368:1
4.1 LINC00368:1
5.0 LINC00368:1
5.1 LINC00368:1
5.2 LINC00368:1