Transcript: LINC00374:1

Basic information

LNCipedia transcript ID: LINC00374:1 
HGNC Gene Symbol: LINC00374    
HGNC Full Gene Name: long intergenic non-protein coding RNA 374
Ensembl Gene ID: ENSG00000232954
Ensembl Transcript ID: ENST00000454780
RefSeq ID: NR_132367
Location (hg38): chr13:58211697-58233117
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 800 bp
Exons: 7
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT034075; ENST00000454780.2; NR_132367.1
Alternative gene names: ENSG00000232954.2; LINC00374;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.4937 non-coding 
CPAT coding probability 2.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00374:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DIAPH3-15:1
4.0 LINC00374:1
4.1 LINC00374:1
5.0 LINC00374:1
5.1 LINC00374:1
5.2 LINC00374:1