Transcript: LINC00380:1

Basic information

LNCipedia transcript ID: LINC00380:1 
LNCipedia gene ID: LINC00380
Location (hg38): chr13:91087255-91091439
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 397 bp
Exons: 3
Sources: Refseq - Dec 2014
Alternative transcript names: NR_104057
Alternative gene names: TCONS_00021685


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -603.045 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00380:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DCT-7:2
4.0 LINC00380:1
4.1 LINC00380:1
5.0 LINC00380:1
5.1 LINC00380:1
5.2 LINC00380:1