Transcript: LINC00446:2

Basic information

LNCipedia transcript ID: LINC00446:2 
LNCipedia gene ID: LINC00446
RefSeq ID: NR_047028
Location (hg38): chr13:78012883-78053595
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 608 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT034441; NR_047028; NR_047028.1
Alternative gene names: ; LINC00446


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -210.9928 non-coding 
CPAT coding probability 5.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00446:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLAIN1-2:4
4.0 LINC00446:2
4.1 LINC00446:2
5.0 LINC00446:2
5.1 LINC00446:2
5.2 LINC00446:2