Transcript: LINC00446:5

Basic information

LNCipedia transcript ID: LINC00446:5 
LNCipedia gene ID: LINC00446
Location (hg38): chr13:78029980-78037219
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 309 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT034442; FPKM1_group_8138_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -274.5627 non-coding 
CPAT coding probability 3.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00446:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLAIN1-2:6
4.0 LINC00446:5
4.1 LINC00446:5
5.0 LINC00446:5
5.1 LINC00446:5
5.2 LINC00446:5