Transcript: LINC00446:6

Basic information

LNCipedia transcript ID: LINC00446:6 
LNCipedia gene ID: LINC00446
Location (hg38): chr13:78030936-78037219
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 208 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000438327; ENST00000438327.1; LINC00446-001; OTTHUMT00000045355.1; NONHSAT140141
Alternative gene names: ENSG00000229249; RP11-267I18.1; ENSG00000229249.1; LINC00446; OTTHUMG00000017115.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00446:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLAIN1-2:2
3.1 lnc-SLAIN1-2:2
4.0 LINC00446:6
4.1 LINC00446:6
5.0 LINC00446:6
5.1 LINC00446:6
5.2 LINC00446:6