Transcript: LINC00462:1

Basic information

LNCipedia transcript ID: LINC00462:1 
LNCipedia gene ID: LINC00462
RefSeq ID: NR_051983
Location (hg38): chr13:48576974-48580901
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1023 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT033722; NR_051983; NR_051983.1
Alternative gene names: ; LINC00462


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.2702 non-coding 
CPAT coding probability 16.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00462:1 yes no no no

Available literature

  1. Gong (2017), Long noncoding RNA linc00462 promotes hepatocellular carcinoma progression., Biomed. Pharmacother.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RCBTB2-3:2
4.0 LINC00462:1
4.1 LINC00462:1
5.0 LINC00462:1
5.1 LINC00462:1
5.2 LINC00462:1