Transcript: LINC00469:2

Basic information

LNCipedia transcript ID: LINC00469:2 
HGNC Gene Symbol: LINC00469    
HGNC Full Gene Name: long intergenic non-protein coding RNA 469
Ensembl Gene ID: ENSG00000177338
Ensembl Transcript ID: ENST00000321800
Location (hg38): chr17:73750330-73828520
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 708 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000321800.7; LINC00469-001; OTTHUMT00000396490.1; NONHSAT055741; ENST00000321800.11
Alternative gene names: ENSG00000177338.8; LINC00469; OTTHUMG00000167833.3; ENSG00000177338.9; ENSG00000177338.13; FLJ40319


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.0275 non-coding 
CPAT coding probability 55.77% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00469:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SDK2-2:2
4.0 LINC00469:2
4.1 LINC00469:2
5.0 LINC00469:2
5.1 LINC00469:2
5.2 LINC00469:2