Transcript: LINC00477:3

Basic information

LNCipedia transcript ID: LINC00477:3 
LNCipedia gene ID: LINC00477
Location (hg38): chr12:24563991-24584165
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4247 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000197503.4|MICT00000075320.1
Alternative gene names: FLJ32894; FAM191B

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 28.8029 non-coding 
CPAT coding probability 29.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00477:3 no no no no

Available literature

  1. Ota (2004), Complete sequencing and characterization of 21,243 full-length human cDNAs., Nat. Genet.

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00477:3
5.0 LINC00477:3
5.1 LINC00477:3
5.2 LINC00477:3