Transcript: LINC00477:4

Basic information

LNCipedia transcript ID: LINC00477:4 
LNCipedia gene ID: LINC00477
Location (hg38): chr12:24566964-24584165
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1707 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000197503.4|ENST00000483544.1
Alternative gene names: FLJ32894; FAM191B


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.7846 non-coding 
CPAT coding probability 10.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00477:4 no no no no

Available literature

  1. Ota (2004), Complete sequencing and characterization of 21,243 full-length human cDNAs., Nat. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00477:4
5.0 LINC00477:4
5.1 LINC00477:4
5.2 LINC00477:4