Transcript: LINC00482:4

Basic information

LNCipedia transcript ID: LINC00482:4 
HGNC Gene Symbol: LINC00482    
HGNC Full Gene Name: long intergenic non-protein coding RNA 482
Ensembl Gene ID: ENSG00000185168
Ensembl Transcript ID: ENST00000577000
Location (hg38): chr17:81305326-81307727
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 461 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000577000.1; LINC00482-002; OTTHUMT00000439606.1; NONHSAT056464
Alternative gene names: ENSG00000185168.5; LINC00482; OTTHUMG00000177904.1; FLJ39421


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.6655 non-coding 
CPAT coding probability 49.11% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00482:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LINC00482-1:2
4.0 LINC00482:4
4.1 LINC00482:4
5.0 LINC00482:4
5.1 LINC00482:4
5.2 LINC00482:4