Transcript: LINC00484:6

Basic information

LNCipedia transcript ID: LINC00484:6 
LNCipedia gene ID: LINC00484
Location (hg38): chr9:91159769-91165576
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2745 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000423719; ENST00000423719.1; LINC00484-001; OTTHUMT00000053025.1; NONHSAT133117
Alternative gene names: ENSG00000235641; C9orf73; ENSG00000235641.1; LINC00484; OTTHUMG00000020203.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.8516 non-coding 
CPAT coding probability 7.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00484:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SYK-3:1
3.1 lnc-SYK-4:1
4.0 LINC00484:6
4.1 LINC00484:6
5.0 LINC00484:6
5.1 LINC00484:6
5.2 LINC00484:6