Transcript: LINC00486:2

Basic information

LNCipedia transcript ID: LINC00486:2 
LNCipedia gene ID: LINC00486
Location (hg38): chr2:32825429-32841228
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 714 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003627; NONHSAT069992
Alternative gene names: XLOC_001418; linc-LTBP1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.5693 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00486:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TTC27-1:2
3.1 lnc-TTC27-1:2
4.0 LINC00486:2
4.1 LINC00486:2
5.0 LINC00486:2
5.1 LINC00486:2
5.2 LINC00486:2