Transcript: LINC00486:20

Basic information

LNCipedia transcript ID: LINC00486:20 
LNCipedia gene ID: LINC00486
Location (hg38): chr2:32928065-32945259
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 262 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00004745
Alternative gene names: XLOC_001418; linc-LTBP1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -196.5383 non-coding 
CPAT coding probability 1.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00486:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TTC27-1:16
3.1 lnc-TTC27-1:16
4.0 LINC00486:20
4.1 LINC00486:20
5.0 LINC00486:20
5.1 LINC00486:20
5.2 LINC00486:20