Transcript: LINC00486:6

Basic information

LNCipedia transcript ID: LINC00486:6 
LNCipedia gene ID: LINC00486
Location (hg38): chr2:32836530-32841901
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 788 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004744; NONHSAT069996
Alternative gene names: XLOC_001418; linc-LTBP1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.5693 non-coding 
CPAT coding probability 2.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00486:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TTC27-1:6
3.1 lnc-TTC27-1:6
4.0 LINC00486:6
4.1 LINC00486:6
5.0 LINC00486:6
5.1 LINC00486:6
5.2 LINC00486:6