Transcript: LINC00502:2

Basic information

LNCipedia transcript ID: LINC00502:2 
HGNC Gene Symbol: LINC00502    
HGNC Full Gene Name: long intergenic non-protein coding RNA 502
Ensembl Gene ID: ENSG00000224851
Ensembl Transcript ID: ENST00000423621
Location (hg38): chr10:91047166-91062159
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 445 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000423621.1; LINC00502-001; OTTHUMT00000049361.1; NONHSAT015619
Alternative gene names: ENSG00000224851.1; LINC00502; OTTHUMG00000018738.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -301.4222 non-coding 
CPAT coding probability 5.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00502:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPP30-4:1
4.0 LINC00502:2
4.1 LINC00502:2
5.0 LINC00502:2
5.1 LINC00502:2
5.2 LINC00502:2