Transcript: LINC00504:1

Basic information

LNCipedia transcript ID: LINC00504:1 
LNCipedia gene ID: LINC00504
Location (hg38): chr4:14474087-14888169
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1050 bp
Exons: 7
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000505089.1; LINC00504-003; OTTHUMT00000360859.1
Alternative gene names: ENSG00000248360.2; LINC00504; OTTHUMG00000160121.4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.0908 non-coding 
CPAT coding probability 53.92% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00504:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBXL5-4:1
4.0 LINC00504:1
4.1 LINC00504:1
5.0 LINC00504:1
5.1 LINC00504:1
5.2 LINC00504:1