Transcript: LINC00518:13

Basic information

LNCipedia transcript ID: LINC00518:13 
LNCipedia gene ID: LINC00518
Location (hg38): chr6:10429796-10434807
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1218 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000183674.7|ENST00000491317.1
Alternative gene names: MGC40222


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -55.5284 non-coding 
CPAT coding probability 2.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00518:13 no no no no

Available literature

  1. Gerami (2014), Development of a novel noninvasive adhesive patch test for the evaluation of pigmented lesions of the skin., J. Am. Acad. Dermatol.
  2. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00518:13
5.0 LINC00518:13
5.1 LINC00518:13
5.2 LINC00518:13