Transcript: LINC00526:4

Basic information

LNCipedia transcript ID: LINC00526:4 
LNCipedia gene ID: LINC00526
RefSeq ID: NR_026849
Location (hg38): chr18:5236724-5238029
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1306 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT057060; NR_026849; NR_026849.1
Alternative gene names: MGC17515; HsT959; LINC00526


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -71.3138 non-coding 
CPAT coding probability 23.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00526:4 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C18orf42-1:4
4.0 LINC00526:4
4.1 LINC00526:4
5.0 LINC00526:4
5.1 LINC00526:4
5.2 LINC00526:4