Transcript: LINC00528:10

Basic information

LNCipedia transcript ID: LINC00528:10 
LNCipedia gene ID: LINC00528
Location (hg38): chr22:17774613-17775990
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1378 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269220.1|ENCT00000276391.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.0132 non-coding 
CPAT coding probability 13.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00528:10 no no no no

Available literature

  1. Ota (2004), Complete sequencing and characterization of 21,243 full-length human cDNAs., Nat. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BCL2L13-1:5
5.0 lnc-BCL2L13-1:5
5.1 LINC00528:2
5.2 LINC00528:10