Transcript: LINC00528:12

Basic information

LNCipedia transcript ID: LINC00528:12 
LNCipedia gene ID: LINC00528
Location (hg38): chr22:17774902-17779474
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1399 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029501; NONHSAT083229
Alternative gene names: XLOC_014144; linc-PEX26-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.8313 non-coding 
CPAT coding probability 2.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00528:12 no no no no

Available literature

  1. Ota (2004), Complete sequencing and characterization of 21,243 full-length human cDNAs., Nat. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BCL2L13-1:1
3.1 lnc-BCL2L13-1:1
4.0 lnc-BCL2L13-1:1
4.1 lnc-BCL2L13-1:1
5.0 lnc-BCL2L13-1:1
5.1 LINC00528:4
5.2 LINC00528:12