Transcript: LINC00528:13

Basic information

LNCipedia transcript ID: LINC00528:13 
LNCipedia gene ID: LINC00528
RefSeq ID: NR_103718
Location (hg38): chr22:17777290-17779481
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2192 bp
Exons: 1
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_103718; NR_103718.1
Alternative gene names: LINC00528


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.8313 non-coding 
CPAT coding probability 33.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00528:13 no no no no

Available literature

  1. Ota (2004), Complete sequencing and characterization of 21,243 full-length human cDNAs., Nat. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BCL2L13-1:3
4.0 lnc-BCL2L13-1:3
4.1 lnc-BCL2L13-1:3
5.0 lnc-BCL2L13-1:3
5.1 LINC00528:5
5.2 LINC00528:13