Transcript: LINC00528:14

Basic information

LNCipedia transcript ID: LINC00528:14 
HGNC Gene Symbol: LINC00528    
HGNC Full Gene Name: long intergenic non-protein coding RNA 528
Ensembl Gene ID: ENSG00000269220
Ensembl Transcript ID: ENST00000600723
Location (hg38): chr22:17777322-17779481
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2160 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000600723.1
Alternative gene names: ENSG00000269220.1; LINC00528


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.8313 non-coding 
CPAT coding probability 33.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00528:14 no no no no

Available literature

  1. Ota (2004), Complete sequencing and characterization of 21,243 full-length human cDNAs., Nat. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BCL2L13-1:4
4.0 lnc-BCL2L13-1:4
4.1 lnc-BCL2L13-1:4
5.0 lnc-BCL2L13-1:4
5.1 LINC00528:6
5.2 LINC00528:14