Transcript: LINC00528:15

Basic information

LNCipedia transcript ID: LINC00528:15 
LNCipedia gene ID: LINC00528
Location (hg38): chr22:17777322-17779481
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2160 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269220.1|ENST00000600723.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.8313 non-coding 
CPAT coding probability 20.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00528:15 no no no no

Available literature

  1. Ota (2004), Complete sequencing and characterization of 21,243 full-length human cDNAs., Nat. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BCL2L13-1:7
5.0 lnc-BCL2L13-1:7
5.1 LINC00528:7
5.2 LINC00528:15