Transcript: LINC00528:16

Basic information

LNCipedia transcript ID: LINC00528:16 
LNCipedia gene ID: LINC00528
Location (hg38): chr22:17777586-17780136
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1995 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269220.1|HBMT00000936645.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.1023 non-coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00528:16 no no no no

Available literature

  1. Ota (2004), Complete sequencing and characterization of 21,243 full-length human cDNAs., Nat. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BCL2L13-1:8
5.0 lnc-BCL2L13-1:8
5.1 LINC00528:8
5.2 LINC00528:16