Transcript: LINC00543:4

Basic information

LNCipedia transcript ID: LINC00543:4 
LNCipedia gene ID: LINC00543
RefSeq ID: NR_135254
Location (hg38): chr13:27953526-27955363
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1838 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135254.1
Alternative gene names: LINC00543


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -69.83 non-coding 
CPAT coding probability 67.05% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00543:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC00543:4
5.1 LINC00543:4
5.2 LINC00543:4