Transcript: LINC00587:2

Basic information

LNCipedia transcript ID: LINC00587:2 
LNCipedia gene ID: LINC00587
RefSeq ID: NR_103830
Location (hg38): chr9:102519637-102657509
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 584 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_103830; NR_103830.1
Alternative gene names: bA785H23.1; LINC00587


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.5822 non-coding 
CPAT coding probability 12.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00587:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf107-3:2
4.0 LINC00587:2
4.1 LINC00587:2
5.0 LINC00587:2
5.1 LINC00587:2
5.2 LINC00587:2