Transcript: LINC00589:11

Basic information

LNCipedia transcript ID: LINC00589:11 
LNCipedia gene ID: LINC00589
Location (hg38): chr8:29529336-29530274
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 608 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014959; NONHSAT125821
Alternative gene names: XLOC_007038; linc-DUSP4-6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -173.8414 non-coding 
CPAT coding probability 2.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00589:11 no no no no

Available literature

  1. Zhang (2018), Long noncoding RNA TSLNC8 is a tumor suppressor that inactivates the interleukin-6/STAT3 signaling pathway., Hepatology


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DUSP4-3:1
3.1 lnc-DUSP4-4:1
4.0 LINC00589:11
4.1 LINC00589:11
5.0 LINC00589:11
5.1 LINC00589:11
5.2 LINC00589:11