Transcript: LINC00589:3

Basic information

LNCipedia transcript ID: LINC00589:3 
LNCipedia gene ID: LINC00589
Location (hg38): chr8:29498583-29816292
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7970 bp
Exons: 22
Sources: NONCODE v4
Alternative transcript names: NONHSAT125817
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.4453 non-coding 
CPAT coding probability 19.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00589:3 no no no no

Available literature

  1. Zhang (2018), Long noncoding RNA TSLNC8 is a tumor suppressor that inactivates the interleukin-6/STAT3 signaling pathway., Hepatology


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DUSP4-5:5
4.0 LINC00589:3
4.1 LINC00589:3
5.0 LINC00589:3
5.1 LINC00589:3
5.2 LINC00589:3