Transcript: LINC00589:9

Basic information

LNCipedia transcript ID: LINC00589:9 
LNCipedia gene ID: LINC00589
Location (hg38): chr8:29721262-29726423
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1301 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00014555
Alternative gene names: XLOC_007039; linc-DUSP4-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.5895 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00589:9 no no no no

Available literature

  1. Zhang (2018), Long noncoding RNA TSLNC8 is a tumor suppressor that inactivates the interleukin-6/STAT3 signaling pathway., Hepatology


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM66-2:4
3.1 lnc-DUSP4-5:4
4.0 LINC00589:9
4.1 LINC00589:9
5.0 LINC00589:9
5.1 LINC00589:9
5.2 LINC00589:9